{
    "bids_dir": "[[NIPOPPY_DPATH_BIDS]]",
    "output_dir": "[[NIPOPPY_DPATH_PIPELINE_OUTPUT]]",
    "analysis_level": "participant",
    "skip_bids_validation": true,
    "participant_label": [
        "[[NIPOPPY_PARTICIPANT_ID]]"
    ],
    "bids_database_dir": "[[NIPOPPY_DPATH_PIPELINE_BIDS_DB]]",
    "nprocs": "8",
    "omp_nthreads": "4",
    "mem": "4G",
    "anat_only": true,
    "level": "full",
    "output_spaces": [
        "MNI152NLin2009cAsym"
    ],
    "return_all_components": true,
    "fs_license_file": "[[FREESURFER_LICENSE_FILE]]",
    "fs_subjects_dir": "[[NIPOPPY_DPATH_DERIVATIVES]]/freesurfer/7.3.2/output/[[NIPOPPY_BIDS_SESSION_ID]]",
    "verbose_count": "-vv",
    "work_dir": "[[NIPOPPY_DPATH_PIPELINE_WORK]]",
    "write_graph": true,
    "notrack": true
}